Ruprecht-Karls-Universität Heidelberg
HBIGS homepage | Forgot password

Publications by HBIGS PhD students:

Publications in 2012

Stevermann L, Liakopoulos D (2012) Molecular mechanisms in spindle positioning: structures and new concepts. Curr Opin Cell Biol, doi:pii: S0955-0674(12)00168-8. 10.1016/

Seyffer F, Kummer E, Oguchi Y, Winkler J, Kumar M, Zahn R, Sourjik V, Bukau B, Mogk A (2012) Hsp70 proteins bind Hsp100 regulatory M domains to activate AAA+ disaggregase at aggregate surfaces. Nat Struct Mol Biol, 19,12, 1347–1355

Kityk R, Kopp J, Sinning I, Mayer MP (2012) Structure and Dynamics of the ATP-Bound Open Conformation of Hsp70 Chaperones. Mol Cell, doi:pii: S1097-2765(12)00823-4. 10.1016/j.molcel.2012.09.023

Seidel T, Scholl S, Krebs M, Rienmüller F, Marten I, Hedrich R, Hanitzsch M, Janetzki P, Dietz KJ, Schumacher K (2012) Regulation of the V-type ATPase by redox modulation. Biochem J, 448, 243–251

Wald D, Teucher B, Dinkel J, Kaaks R, Delorme S, Boeing H, Seidensaal K, Meinzer HP, Heimann T (2012) Automatic quantification of subcutaneous and visceral adipose tissue from whole-body magnetic resonance images suitable for large cohort studies. J Magn Reson Imaging, 36, 6, 1421-34

Krüger F, Krebs M, Viotti C, Langhans M, Schumacher K, Robinson DG (2012) PDMP induces rapid changes in vacuole morphology in Arabidopsis root cells. J Exp Bot, doi: 10.1093/jxb/ers345

Färber V, Erben E, Sharma S, Stoecklin G, Clayton C (2012) Trypanosome CNOT10 is essential for the integrity of the NOT deadenylase complex and for degradation of many mRNAs. Nucleic Acids Res, 41, 2, 1211-22

Höckendorf B, Thumberger T, Wittbrodt J (2012) Quantitative analysis of embryogenesis: a perspective for light sheet microscopy. Dev Cell, 23, 6, 1111-20

Romero-Brey I, Merz A, Chiramel A, Lee JY, Chlanda P, Haselman U, Santarella-Mellwig R, Habermann A, Hoppe S, Kallis S, Walther P, Antony C, Krijnse-Locker J, Bartenschlager R (2012) Three-dimensional architecture and biogenesis of membrane structures associated with hepatitis C virus replication. PLoS Pathog, 8, 12, e1003056

Kilian N*, Dittmer M*, Cyrklaff M, Ouermi D, Bisseye C, Simpore J, Frischknecht F, Sanchez CP, Lanzer M (equal contribution) (2012) Hemoglobin S and C affect the motion of Maurer's clefts in P. falciparum-infected erythrocytes. Cell Microbiol, doi: 10.1111/cmi.12102. [Epub ahead of print]

Abraham L, Fackler OT (2012) HIV-1 Nef: a multifaceted modulator of T cell receptor signaling. Cell Commun Signal, 10, 1, 39

Serva A, Knapp B, Tsai YT, Claas C, Lisauskas T, Matula P, Harder N, Kaderali L, Rohr K, Erfle H, Eils R, Braga V, Starkuviene V (2012) miR-17-5p Regulates Endocytic Trafficking through Targeting TBC1D2/Armus. PLoS One, 7, 12, e52555

Daiber P, Genovese F, Schriever VA, Hummel T, Möhrlen F, Frings S (2012) Neuropeptide receptors provide a signalling pathway for trigeminal modulation of olfactory transduction. Eur J Neurosci, doi: 10.1111/ejn.12066. [Epub ahead of print]

Liebler SS, Feldner A, Adam G, Korff T, Augustin HG, Fischer A. (2012) No Evidence for a Functional Role of Bi-Directional Notch Signaling during Angiogenesis. PLoS One, 7, 12, e53074

Spaich S, Will RD, Just S, Spaich S, Kuhn C, Frank D, Berger IM, Wiemann S, Korn B, Koegl M, Backs J, Katus HA, Rottbauer W, Frey N (2012) F-box and leucine-rich repeat protein 22 is a cardiac-enriched F-box protein that regulates sarcomeric protein turnover and is essential for maintenance of contractile function in vivo. Circ Res, 111, 12, 1504-16

Schlecker E, Stojanovic A, Eisen C, Quack C, Falk CS, Umansky V, Cerwenka A (2012) Tumor-infiltrating monocytic myeloid-derived suppressor cells mediate CCR5-dependent recruitment of regulatory T cells favoring tumor growth. J Immunol, 189, 12, 5602-11

Zink S, Grosse L, Freikamp A, Bänfer S, Müksch F, Jacob R (2012) Tubulin detyrosination promotes monolayer formation and apical trafficking in epithelial cells. J Cell Sci 125, 24, 5998-6008

Ernst AM, Contreras FX, Thiele C, Wieland F, Brügger B (2012) Mutual recognition of sphingolipid molecular species in membranes. Biochim Biophys Acta, 1818, 11, 2616-2622

Luke-Glaser S, Poschke H, Luke B (2012) Getting in (and out of) the loop: regulating higher order telomere structures. Front Oncol, 2, 180

Betge J, Kornprat P, Pollheimer MJ, Lindtner RA, Schlemmer A, Rehak P, Vieth M, Langner C (2012) Tumor Budding is an Independent Predictor of Outcome in AJCC/UICC Stage II Colorectal Cancer. Ann Surg Oncol, 19, 12, 3706-12

Fredebohm J, Boettcher M, Eisen C, Gaida MM, Heller A, Keleg S, Tost J, Greulich-Bode KM, Hotz-Wagenblatt A, Lathrop M, Giese NA, Hoheisel JD (2012) Establishment and characterization of a highly tumourigenic and cancer stem cell enriched pancreatic cancer cell line as a well defined model system. PLoS One, 7, 11, e48503

Sturm D, ... Bender S, ... Lichter P, Plass C, Jabado N, Pfister SM. (2012) Hotspot Mutations in H3F3A and IDH1 Define Distinct Epigenetic and Biological Subgroups of Glioblastoma Cancer Cell, 22, 4, 425-437

Hofmann S, Cherkasov V, Bankhead P, Bukau B, Stoecklin G. (2012) Translation suppression promotes stress granule formation and cell survival in response to cold shock. Mol Biol Cell, 23, 19, 3786-3800

Mundinger TA, Sommerfeld A, Reinehr R, Spatz JP, Häussinger D, Boehm H (2012) Investigating Cell-ECM Contact Changes in Response to Hypoosmotic Stimulation of Hepatocytes In Vivo with DW-RICM. PLoS One, 7, 10

Most P, Lerchenmüller C, Rengo G, Mahlmann A, Ritterhoff J, Rohde D, Goodman C, Busch CJ, Laube F, Heissenberg J, Pleger ST, Weiss N, Katus HA, Koch WJ, Peppel K (2012) S100A1 Deficiency Impairs Post-Ischemic Angiogenesis via Compromised Proangiogenic Endothelial Cell Function and Nitric Oxide Synthase Regulation. Circ Res, doi: 10.1161/​CIRCRESAHA.112.275156

Hennig BP, Bendrin K, Zhou Y, Fischer T (2012) Chd1 chromatin remodelers maintain nucleosome organization and repress cryptic transcription. EMBO Rep, 13, 11, 997-1003

Hassler S, Lemke L, Jung B, Möhlmann T, Krüger F, Schumacher K, Espen L, Martinoia E, Neuhaus HE (2012) Lack of the Golgi phosphate transporter PHT4;6 causes strong developmental defects, constitutively activated disease resistance mechanisms and altered intracellular phosphate compartmentation in Arabidopsis. The Plant Journal, doi: 10.1111/j.1365-313X.2012.05106.x.

Ratzke C, Nguyen MN, Mayer MP, Hugel T (2012) From a ratchet mechanism to random fluctuations evolution of Hsp90's mechanochemical cycle. J Mol Biol, 423, 3, 462-71

Aller I, Meyer AJ (2012) The oxidative protein folding machinery in plant cells. Protoplasma, DOI 10.1007/s00709-012-0463-x

Tataroglu O, Lauinger L, Sancar G, Jakob K, Brunner M, Diernfellner AC (2012) Glycogen synthase kinase is a regulator of the circadian clock of Neurospora crassa. J Biol Chem, 287, 44, 36936-43

An J, Gao Y, Wang J, Zhu Q, Ma Y, Wu J, Sun J, Tang Y (2012) Flavokawain B induces apoptosis of non-small cell lung cancer H460 cells via Bax-initiated mitochondrial and JNK pathway. Biotechnol Lett, 34, 10, 1781-8

Elkady M, Nieß R, Schaible AM, Bauer J, Luderer S, Ambrosi G, Werz O, Laufer SA. (2012) Modified acidic nonsteroidal anti-inflammatory drugs as dual inhibitors of mPGES-1 and 5-LOX. J Med Chem, 55, 20, 8958-62

Stelter P, Kunze R, Radwan M, Thomson E, Thierbach K, Thoms M, Hurt E (2012) Monitoring Spatiotemporal Biogenesis of Macromolecular Assemblies by Pulse-Chase Epitope Labeling. Mol Cell, 47, 5, 788-96

Lüddeke F, Dikfidan A, Harder J (2012) Physiology of deletion mutants in the anaerobic beta-myrcene degradation pathway in Castellaniella defragrans. BMC Microbiol, 12, 1, 192

Poschke H, Dees M, Chang M, Amberkar S, Kaderali L, Rothstein R, Luke B (2012) Rif2 Promotes a Telomere Fold-Back Structure through Rpd3L Recruitment in Budding Yeast. PLoS Genet 8, 9

Zhang WL, Liu ZY, Liu, Z, Li FL (2012) Butanol production from corncob residue using Clostridium beijerinckii NCIMB 8052. Lett Appl Microbiol, 55, 3, 240-6

Kitanovic A*, Bonowski F*, Heigwer F*, Ruoff P, Kitanovic I, Ungewiss C, Wölfl S (*equal contribution) (2012) Acetic acid treatment in S. cerevisiae creates significant energy deficiency and nutrient starvation that is dependent on the activity of the mitochondrial transcriptional complex Hap2-3-4-5. Front Oncol, 21, 2, 118

Maicher A, Kastner L, Dees M, Luke B (2012) Deregulated telomere transcription causes replication-dependent telomere shortening and promotes cellular senescence. Nucl. Acids Res, 40, 14, 6649-59

Malsam J*, Parisotto D*, Bharat TA, Scheutzow A, Krause JM, Briggs JA, Söllner TH (*equal contribution) (2012) Complexin arrests a pool of docked vesicles for fast Ca(2+)-dependent release. EMBO J, 31, 15, 3270–3281

Sorge S, Ha N, Polychronidou M, Friedrich J, Bezdan D, Kaspar P, Schaefer MH, Ossowski S, Henz SR, Mundorf J, Rätzer J, Papagiannouli F, Lohmann I (2012) The cis-regulatory code of Hox function in Drosophila. EMBO J, 31, 15, 3323-33

Abraham L, Bankhead P, Pan X, Engel U, Fackler OT. (2012) HIV-1 Nef limits communication between linker of activated T cells and SLP-76 to reduce formation of SLP-76-signaling microclusters following TCR stimulation J Immunol, 189, 4, 1898-910

Lerich A, Hillmer S, Langhans M, Scheuring D, van Bentum P, Robinson DG (2012) ER import sites and their relationship to ER exit sites: a new model for bidirectional ER-Golgi transport in higher plants. Front Plant Sci, 3, 143

Wolf W, Kilic A, Schrul B, Lorenz H, Schwappach B, Seedorf M (2012) Yeast ist2 recruits the endoplasmic reticulum to the plasma membrane and creates a ribosome-free membrane microcompartment. PLoS One, 7, 7, e39703

Parisotto D, Malsam J, Scheutzow A, Krause JM, Sollner TH. (2012) SNAREpin Assembly by Munc18-1 Requires Previous Vesicle Docking by Synaptotagmin1. J Biol Chem, 287, 37, 31041-9

Oliveira AM, Hemstedt TJ, Bading H (2012) Rescue of aging-associated decline in Dnmt3a2 expression restores cognitive abilities. Nat Neurosci, doi:10.1038/nn.3151

Menssen R, Schweiggert J, Schreiner J, Kusevic D, Reuther J, Braun B, Wolf DH. (2012) Exploring the topology of the Gid complex, the E3 ubiquitin ligase involved in catabolite induced degradation of gluconeogenic enzymes. J Biol Chem, 287, 30, 25602-14

McCall J, Weidner N, Blesch A (2012) Neurotrophic factors in combinatorial approaches for spinal cord regeneration. Cell Tissue Res, 349, 1, 27-37

Yoshikawa HY, Cui J, Kratz K, Matsuzaki T, Nakabayashi S, Marx A, Engel U, Lendlein A, Tanaka M (2012) Quantitative Evaluation of Adhesion of Osteosarcoma Cells to Hydrophobic Polymer Substrate with Tunable Elasticity. J Phys Chem B, 116, 28, 8024–8030

Drahushchenko OO, Minia IĬ, Poliezhaeva TA, Starosyla DB, Karpova IS, Obolens'ka MIu, Rybalko SL (2012) Influence of chemically different antiviral substances on the expression of IFNα, PKR, OAS1a and RNAse L genes. Ukr Biokhim Zh, 84, 4, 32-40

Margolis EB, Toy B, Himmels P, Morales M, Fields HL (2012) Identification of Rat Ventral Tegmental Area GABAergic Neurons. PLoS ONE 7, 7, e42365. doi:10.1371/journal.pone.0042365

Birke H, Müller SJ, Rother M, Zimmer AD, Hoernstein SN, Wesenberg D, Wirtz M, Krauss GJ, Reski R, Hell R (2012) The relevance of compartmentation for cysteine synthesis in phototrophic organisms. Protoplasma, DOI 10.1007/s00709-012-0411-9

Neumann S*, Große K*, Sourjik V (*equal contribution) (2012) Chemotactic signaling via carbohydrate phosphotransferase systems in Escherichia coli. Proc Natl Acad Sci U S A, 109, 30, 12159-12164

Maicher A, Kastner L, Luke B (2012) Telomeres and disease: Enter TERRA RNA Biology, 9, 6, 843-9

Pedrolli DB, Matern A, Wang J, Ester M, Siedler K, Breaker R, Mack M (2012) A highly specialized flavin mononucleotide riboswitch responds differently to similar ligands and confers roseoflavin resistance to Streptomyces davawensis. Nucl. Acids Res, 40, 17, 8662-73

Sharma A*, Zeng Z*, Ju L, Murai J, Umans L, Vermeire L, Pommier Y, Takeda S, Huylebroeck D, Caldecott KW, El-Khamisy SF (*equal contribution) (2012) TDP2 promotes the Repair of Topoisomerase-1 induced DNA damage in the absence of TDP1. Nucleic Acids Res, 40, 17, 8371-80

Holenya P*, Heigwer F *, Wölfl S (* equal contribution) (2012) KOMA: ELISA-microarray calibration and data analysis based on kinetic signal amplification. J Immunol Methods, 380, 1-2, 10-5

Bengsch B, Seigel B, Flecken T, Wolanski J, Blum HE, Thimme R (2012) Human Th17 cells express high levels of enzymatically active dipeptidylpeptidase IV (CD26). J Immunol, 188, 11, 5438-47

Greither T, Koser F, Kappler M, Bache M, Lautenschläger C, Göbel S, Holzhausen HJ, Wach S, Würl P, Taubert H (2012) Expression of human Piwi-like genes is associated with prognosis for soft tissue sarcoma patients. BMC Cancer, 12, 272

Maicher A, Kastner L, Luke B (2012) Telomeres and disease: enter TERRA. RNA Biol, 9, 6, 843-9

Birke H, Haas FH, De Kok LJ, Balk J, Wirtz M, Hell R (2012) Cysteine biosynthesis, in concert with a novel mechanism, contributes to sulfide detoxification in mitochondria of Arabidopsis thaliana. Biochem J, 445, 275–283

Xu Z, Dong S, Du D, Jiang N, Sun P, Wang H, Yin L, Zhang X, Cao X, Zhen X, Hu Y (2012) Generation and characterization of hD5 and C-terminal Mutant hD(5m) transgenic rats. Brain Res, 1448, 27-41

Ercan E, Chung SH, Bhardwaj R, Seedorf M (2012) Di-arginine signals and the K-rich domain retain the Ca(2+) sensor STIM1 in the endoplasmic reticulum. Traffic, 13, 7, 992-1003

Kienle E, Senis E, Börner K, Niopek D, Wiedtke E, Grosse S, Grimm D. (2012) Engineering and Evolution of Synthetic Adeno-Associated Virus (AAV) Gene Therapy Vectors via DNA Family Shuffling. J Vis Exp, 2, 62, pii 3819

Hahne H, Neubert P, Kuhn K, Etienne C, Bomgarden R, Rogers JC, Kuster B (2012) Carbonyl-reactive tandem mass tags for the proteome-wide quantification of N-linked glycans. Anal Chem, 84,8, 3716-24

Ramialison M, Reinhardt R, Henrich T, Wittbrodt B, Kellner T, Lowy CM, Wittbrodt J (2012) Cis-regulatory properties of medaka synexpression groups. Development, 139, 5, 917-28

Zhai Z, Ha N, Papagiannouli F, Hamacher-Brady A, Brady N, Sorge S, Bezdan D, Lohmann I (2012) Antagonistic regulation of apoptosis and differentiation by the Cut transcription factor represents a tumor-suppressing mechanism in Drosophila. PLoS Genetics, 8, 3, e1002582.

Garrido C, Paco L, Romero I, Berruguilla E, Stefanski J, Collado A, Algarra I, Garrido F, Garcia-Lora AM (2012) MHC class I molecules act as tumor suppressor genes regulating the cell cycle gene expression, invasion and intrinsic tumorigenicity of melanoma cells. Carcinogenesis, 33, 3, 687-93

Hofmann TW, Hänselmann S, Janiesch JW, Rademacher A, Böhm CH (2012) Applying microdroplets as sensors for label-free detection of chemical reactions. Lab Chip, 12, 5, 916-22

Lee CT, Graf C, Mayer FJ, Richter SM, Mayer MP (2012) Dynamics of the regulation of Hsp90 by the co-chaperone Sti1. EMBO J. 2012 Mar 21;31(6):1518-28.

McCall J, Nicholson L, Weidner N, Blesch A (2012) Optimization of adult sensory neuron electroporation to study mechanisms of neurite growth. Front Mol Neuroscience, 5, 11

Kruss S, Srot V, van Aken P, Spatz JP (2012) Au-Ag hybrid Nanoparticle Patterns of Tunable Size and Density on Glass and Polymeric Supports. Langmuir, 28, 2, 1562-8

Kruss S, Luise Erpenbeck L, Schön MP, Spatz JP (2012) Circular, nanostructured and biofunctionalized hydrogel microchannels for dynamic cell adhesion studies. Lab Chip, DOI: 10.1039/C2LC40611J

Ouna BA, Nyambega B, Manful T, Helbig C, Males M, Fadda A, Clayton C (2012) Depletion of trypanosome CTR9 leads to gene expression defects. PLoS One, 7, 4, e34256

Mardin BR, Schiebel E (2012) Breaking the ties that bind: New advances in centrosome biology. J Cell Biol, 197, 1, 11-8.

Fleig L, Bergbold N, Sahasrabudhe P, Geiger B, Kaltak L, Lemberg MK (2012) Ubiquitin-Dependent Intramembrane Rhomboid Protease Promotes ERAD of Membrane Proteins. Mol Cell, 47, 4, 558-69

Jones DT, ... Bender S, ... Lichter P (2012) Dissecting the genomic complexity underlying medulloblastoma. Nature, 2, 488, 7409, 100-5.

Czemmel S, Heppel SC, Bogs J (2012) R2R3 MYB transcription factors: key regulators of the flavonoid biosynthetic pathway in grapevine. Protoplasma, 249, 2, 109-118

Teif VB, Vainshtein Y, Caudron-Herger M, Mallm JP, Marth C, Höfer T, Rippe K (2012) Genome-wide nucleosome positioning during embryonic stem cell development. Nat Struct Mol Biol, 19, 11, 1185-92

Kirmse R, Otto H, Ludwig T (2012) The extracellular matrix remodeled: Interdependency of matrix proteolysis, cell adhesion, and force sensing. Commun Integr Biol, 5, 1, 71-73

Shih MD, Hsieh TY, Jian WT, Wu MT, Yang SJ, Hoekstra FA, Hsing YI (2012) Functional studies of soybean (Glycine max L.) seed LEA proteins GmPM6, GmPM11, and GmPM30 by CD and FTIR spectroscopy. Plant Sci, 196, 152–159

Oguchi Y, Kummer E, Seyffer F, Berynskyy M, Anstett B, Zahn R, Wade RC, Mogk A, Bukau B (2012) A tightly regulated molecular toggle controls AAA+ disaggregase. Nat Struct Mol Biol, doi: 10.1038/nsmb.2441

Berkel S, Tang W, Treviño M, Vogt M, Obenhaus HA, Gass P, Scherer SW, Sprengel R, Schratt G, Rappold GA (2012) Inherited and de novo SHANK2 variants associated with autism spectrum disorder impair neuronal morphogenesis and physiology. Hum Mol Genet, 21, 2, 344-357

Alten L, Schuster-Gossler K, Eichenlaub MP, Wittbrodt B, Wittbrodt J, Gossler A (2012) A novel mammal-specific three partite enhancer element regulates node and notochord-specific Noto expression. PLoS One, 7, 10, e47785

ENCODE Project Consortium (...Auer T, Eichenlaub M, Höckendorf B, Kirchmaier S, Reinhardt R, Sinn R...), Bernstein BE, Birney E, Dunham I, Green ED, Gunter C, Snyder M (2012) An integrated encyclopedia of DNA elements in the human genome. Nature, 489, 7414, 57-74

Winz ML, Samanta A, Benzinger D, Jäschke A (2012) Site-specific terminal and internal labeling of RNA by poly(A) polymerase tailing and copper-catalyzed or copper-free strain-promoted click chemistry. Nucleic Acids Res, 40, 10, e78

Reis Y, Bernardo-Faura M, Richter D, Wolf T, Brors B, Hamacher-Brady A, Eils R, Brady NR (2012) Multi-Parametric Analysis and Modeling of Relationships between Mitochondrial Morphology and Apoptosis. PLoS ONE, 7, 1, e28694

Ouna BA, Stewart M, Helbig C, Clayton C (2012) The Trypanosoma brucei CCCH zinc finger proteins ZC3H12 and ZC3H13. Mol Biochem Parasitol, 183, 2, 184-8

Speiser A, Kurzyk A, Wawrzynska A, Wirtz M, Sirko A, Hell R (2012) The Role of Cyclophilin CYP20-3 in Activation of Chloroplast Serine Acetyltransferase Under High Light Stress Proceedings of the International Plant Sulfur Workshop, 1, 3, 265-269

Spasic M, Friedel CC, Schott J, Kreth J, Leppek K, Hofmann S, Ozgur S, Stoecklin G (2012) Genome-wide assessment of AU-rich elements by the AREScore algorithm. PLoS Genet, 8, 1, e1002433

Contreras FX*, Ernst AM*, Haberkant P, Björkholm P, Lindahl E, Gönen B, Tischer C, Elofsson A, von Heijne G, Thiele C, Pepperkok R, Wieland F, Brügger B (* equal contribution) (2012) Molecular recognition of a single sphingolipid species by a proteins transmembrane domain. Nature, 481, 7382, 525-299

Oguchi Y, Kummer E, Seyffer F, Berynskyy M, Anstett B, Zahn R, Wade RC, Mogk A, Bukau B (2012) A tightly regulated molecular toggle controls AAA+ disaggregase. Nat Struct Mol Biol, 19, 12, 1338-46

Lüddeke F, Wülfing A, Timke M, Germer F, Weber J, Dikfidan A, Rahnfeld T, Linder D, Meyerdierks A, Harder J (2012) Geraniol and geranial dehydrogenases induced in anaerobic monoterpene degradation by Castellaniella defragrans. Appl Environ Microbiol, 78, 7, 2128-36

Benz J, Sendlmeier C, Barends TR, Meinhart A (2012) Structural Insights into the Effector – Immunity System Tse1/Tsi1 from Pseudomonas aeruginosa. PLoS One, 7, 7, e40453

Ritterhoff J, Most P (2012) Targeting S100A1 in heart failure. Gene Ther, 19, 613–621

Bhat P, Gnanasundram SV, Mani P, Ray PS, Sarkar DB, Das S (2012) Targeting Ribosome assembly on the HCV RNA using a small RNA molecule. RNA Biol, 9, 8

Mandery K, Balk B, Bujok K, Schmidt I, Fromm MF, Glaeser H (2012) Inhibition of hepatic uptake transporters by flavonoids. Eur J Pharm Sci, 12, 46(1-2), 79-85

Boeuf S, Graf F, Fischer J, Moradi B, Little CB, Richter W (2012) Regulation of aggrecanases from the ADAMTS family and aggrecan neoepitope formation during in vitro chondrogenesis of human mesenchymal stem cells. Eur Cell Mater, 23, 320-32

Knezevic P, Curcin S, Aleksic V, Petrusic M, Vlaski L (2012) Phage-antibiotic synergism: a possible approach to combatting Pseudomonas aeruginosa. Res Microbiol, pii: S0923-2508(12)00126-X. doi: 10.1016/j.resmic.2012.08.008.

Krishnamurthy M, Mondal S, Lad AD, Bane K, Ahmed S, Narayanan V, Rajeev R, Chatterjee G, Singh PK, Kumar GR, Kundu M, Ray K (2012) A bright point source of ultrashort hard x-ray pulses using biological cells. Opt Express, 20, 5, 5754-61

Muhle-Goll C, Hoffmann S, Afonin S, Grage SL, Polyansky AA, Windisch D, Zeitler M, Bürck J, Ulrich AS (2012) Hydrophobic matching controls the tilt and stability of the dimeric platelet-derived growth factor receptor (PDGFR) β transmembrane segment. J Biol Chem, 287, 31, 26178-86

Giessen TW, Franke KB, Knappe TA, Kraas FI, Bosello M, Xie X, Linne U, Marahiel MA (2012) Isolation, structure elucidation and biosynthesis of an unusual hydroxamic acid-ester containing siderophore from Actinosynnema mirum. J Nat Prod, 75, 5, 905-1

Manetsch M, Seidel P, Heintz U, Che W, Hughes JM, Ge Q, Sukkar MB, Ammit AJ (2012) TLR2 ligand engagement upregulates airway smooth muscle TNF alpha-induced cytokine production. Am J Physiol Lung Cell Mol Physiol, 302, 9, L838-45

Wolf M, Ninov V, Babel H, Hütter K, Staudt R, Storhas W, Badreddin E (2012) A Laboratory Experiment for Teaching Bioprocess Control -- Part 1: Hardware Setting. Advances in Control Education, 9, 1

Li XZ, Yan J, Huang SH, Zhao L, Wang J, Chen ZY (2012) Identification of a key motif that determines the differential RET and TrkB surface levels in dorsal root ganglion neurons and controls depolarization enhanced RET surface insertion. J Biol Chem, 287, 3, 1932-45

Kumar M, Sourjik V (2012) Physical map and dynamics of the chaperone network in Escherichia coli. Mol Microbiol, 84, 4, 736-47

Rausch T, ... Bender S, ... Lichter P, Pfister SM, Korbel JO (2012) Genome Sequencing of Pediatric Medulloblastoma Links Catastrophic DNA Rearrangements with TP53 Mutations. Cell, 148, 20, 59–71

Erdmann G, Volz C, Boutros M (2012) Systematic approaches to dissect biological processes in stem cells by image-based screening. Biotechnol J, 7, 6, 768-78

Seyffer F, Kummer E, Oguchi Y, Winkler J, Kumar M, Zahn R, Sourjik V, Bukau B, Mogk A (2012) Hsp70 proteins bind Hsp100 regulatory M domains to activate AAA+ disaggregase at aggregate surfaces. Nat Struct Mol Biol, doi: 10.1038/nsmb.2442

Wurst M, Seliger B, Jha BA, Klein C, Queiroz R, Clayton C (2012) Expression of the RNA recognition motif protein RBP10 promotes a bloodstream-form transcript pattern in Trypanosoma brucei. Mol Microbiol, 83, 5, 1048-1063

Erlemann S, Neuner A, Gombos L, Gibeaux R, Anthony C, Schiebel E (2012) An extended gamma-tubulin ring functions as a stable platform in microtubule nucleation. J Cell Biol 197, 1, 59-74

Palani S, Meitinger F, Boehm ME, Lehmann WD, Pereira G (2012) Cdc14-dependent dephosphorylation of Inn1 contributes to Inn1-Cyk3 complex formation. J Cell Sci, doi: 10.1242/​jcs.106021

Meitinger F, Palani S, Pereira G (2012) The power of MEN in cytokinesis. Cell Cycle, 11, 2, 219-28

Ruggieri A, Dazert E, Metz P, Hofmann S, Bergeest JP, Mazur J, Bankhead P, Hiet MS, Kallis S, Alvisi G, Samuel CE, Lohmann V, Kaderali L, Rohr K, Frese M, Stoecklin G, Bartenschlager R. (2012) Dynamic oscillation of translation and stress granule formation mark the cellular response to virus infection. Cell Host Microbe, 12, 1, 71-85

Metz P, Dazert E, Ruggieri A, Mazur J, Kaderali L, Kaul A, Zeuge U, Trippler M, Lohmann V, Binder M, Frese M, Bartenschlager R. (2012) Identification of type I and type II interferon-induced effectors controlling hepatitis C virus replication. Hepatology, doi: 10.1002/hep.25908

Felcht M, Luck R, Schering A, Seidel P, Srivastava K, Hu J, Bartol A, Kienast Y, Vettel C, Loos EK, Kutschera S, Bartels S, Appak S, Besemfelder E, Terhardt D, Chavakis E, Wieland T, Klein C, Thomas M, Uemura A, Goerdt S, Augustin HG (2012) Angiopoietin-2 differentially regulates angiogenesis through TIE2 and integrin signaling. J Clin Invest, 122, 6, 1991-2005

Ouna BA, Nyambega B, Manful T, Helbig C, Males M, Fadda A, Clayton C (2012) Depletion of Trypanosome CTR9 Leads to Gene Expression Defects. PLoS One, 7, 4, e34256

Langhans M, Meckel T, Kress A, Lerich A, Robinson DG (2012) ERES (ER exit sites) and the Secretory Unit Concept. J Microsc, 247, 1, 48-59

Flotho A, Werner A, Winter T, Frank AS, Ehret H, Melchior F (2012) Recombinant reconstitution of sumoylation reactions in vitro. Methods Mol Biol, 832, 93-110.

Gierten J, Hassel D, Schweizer PA, Becker R, Katus HA, Thomas D (2012) Identification and functional characterization of zebrafish K(2P)10.1 (TREK2) two-pore-domain K(+) channels. Biochim Biophys Acta, 1818, 1, 33-41

Wang WB, Feng LX, Yue QX, Wu WY, Guan SH, Jiang BH, Yang M, Liu X, Guo DA (2012) Paraptosis accompanied by autophagy and apoptosis was induced by celastrol, a natural compound with influence on proteasome, ER stress and Hsp90. J Cell Physiol, 227, 5, 2196-206

Acuna Sanhueza G, Faller L, George B, Koffler J, Misetic V, Flechtenmacher C, Dyckhoff G, Plinkert P, Angel P, Simon C, Hess J (2012) Opposing function of MYBBP1A in proliferation and migration of head and neck squamous cell carcinoma cells. BMC Cancer, 12, 1, 72

Dayaram A, Opong A, Jäschke A, Hadfield J, Baschiera M, Dobson RC, Offei SK, Shepherd DN, Martin DP, Varsani A (2012) Molecular characterisation of a novel cassava associated circular ssDNA virus Virus Res, 166, 1-2, 130-5

Betge J, Pollheimer MJ, Lindtner RA, Kornprat P, Schlemmer A, Rehak P, Vieth M, Hoefler G, Langner C (2012) Intramural and extramural vascular invasion in colorectal cancer: prognostic significance and quality of pathology reporting. Cancer, 118, 628-638

Betge J, Langer C, Rehak P (2012) Adjuvant chemotherapy improves survival in patients with American Joint Committee on Cancer stage II colon cancer. Cancer, 118, 2184

Betge J, Schneider NI, Pollheimer MJ, Lindtner RA, Kornprat P, Schlemmer A, Rehak P, Langner C (2012) Is there a rationale to record lymphatic invasion in node-positive colorectal cancer? J Clin Pathol 65, 847-50