Ruprecht-Karls-Universität Heidelberg
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Publications by HBIGS PhD students:

Publications in 2016

Hanebuth MA, Kityk R, Fries SJ, Jain A, Kriel A, Albanese V, Frickey T, Peter C, Mayer MP, Frydman J, Deuerling E (2016) Multivalent contacts of the Hsp70 Ssb contribute to its architecture on ribosomes and nascent chain interaction. Nat Commun, 7, 13695

Montalbano A, Juergensen L, Roeth R, Weiss B, Fukami M, Fricke-Otto S, Binder G, Ogata T, Decker E, Nuernberg G, Hassel D, Rappold GA (2016) Retinoic acid catabolizing enzyme CYP26C1 is a genetic modifier in SHOX deficiency. EMBO Mol Med, 8, 12, 1455-1469

Lin TC, Neuner A, Flemming D, Liu P, Chinen T, Jäkle U, Arkowitz R, Schiebel E (2016) MOZART1 and γ-tubulin complex receptors are both required to turn γ-TuSC into an active microtubule nucleation template. J Cell Biol, pii: jcb.201606092

Konjik V, Brünle S, Demmer U, Vanselow A, Sandhoff R, Ermler U, Mack M (2016) The Crystal Structure of RosB: Insights into the Reaction Mechanism of the First Member of a Family of Flavodoxin-like Enzymes. Angew Chem Int Ed Engl, doi: 10.1002/anie.201610292

Tagliaferri L, Kunz JB, Happich M, Esposito S, Bruckner T, Huebschmann D, Okun JG, Hoffmann GF, Schulz A, Kappe J, Speckmann C, Muckenthaler MU, Kulozik AE (2016) Newborn screening for severe combined immunodeficiency using a novel and simplified method to measure T-cell excision circles (TREC). Clin Immunol, 175, 51-55

Ayyildiz D, Arga KY, Avci FG, Altinisik FE, Gurer C, Gulsoy Toplan G, Kazan D, Wozny K, Brügger B, Mertoglu B, Sariyar Akbulut B (2016) Transcriptomic analysis displays the effect of (-)-roemerine on the motility and nutrient uptake in Escherichia coli. Curr Genet, doi: 10.1007/s00294-016-0673-4

Harak C, Meyrath M, Romero-Brey I, Schenk C, Gondeau C, Schult P, Esser-Nobis K, Saeed M, Neddermann P, Schnitzler P, Gotthardt D, Perez-Del-Pulgar S, Neumann-Haefelin C, Thimme R, Meuleman P, Vondran FW, Francesco R, Rice CM, Bartenschlager R, Lohma (2016) Tuning a cellular lipid kinase activity adapts hepatitis C virus to replication in cell culture. Nat Microbiol, 2, 16247

Chavez JD,..., Lampropoulos A, ..., Bruce JE (2016) A General Method for Targeted Quantitative Cross-Linking Mass Spectrometry. PLoS ONE, 11, 12, e0167547

Knieß RA, Mayer MP (2016) The oxidation state of the cytoplasmic glutathione redox system does not correlate with replicative lifespan in yeast. NPJ Aging Mech Dis, doi: 10.1038/npjamd.2016.28

Sigloch FC, Knopf JD, Weißer J, Gomez-Auli A, Biniossek ML, Petrera A, Schilling O (2016) Proteomic analysis of silenced cathepsin B expression suggests non-proteolytic cathepsin B functionality. Biochim Biophys Acta, 1863, 11, 2700-2709

Bartels MF, Winterhalter PR, Yu J, Liu Y, Lommel M, Möhrlen F, Hu H, Feizi T, Westerlind U, Ruppert T, Strahl S (2016) Protein O-Mannosylation in the Murine Brain: Occurrence of Mono-O-Mannosyl Glycans and Identification of New Substrates. PLoS One, 11, 11, e0166119

Cyrklaff M, Srismith S, Nyboer B, Burda K, Hoffmann A, Lasitschka F, Adjalley S, Bisseye C, Simpore J, Mueller AK, Sanchez CP, Frischknecht F, Lanzer M (2016) Oxidative insult can induce malaria-protective trait of sickle and fetal erythrocytes. Nat Commun, 7, 13401

Cerikan B, Schiebel E (2016) DOCK6 inactivation highlights ISGylation as RHO-GTPase balancer. Cell Cycle., doi 10.1080/15384101.2016.1256153

Fritzsching B*, Hagner M*, Dai L, Christochowitz S, Agrawal R, van Bodegom C, Schmidt S, Schatterny J, Hirtz S, Brown R, Goritzka M, Duerr J, Zhou-Suckow Z, Mall MA (*equal contribution) (2016) Impaired mucus clearance exacerbates allergen-induced type 2 airway inflammation in juvenile mice. J Allergy Clin Immunol, doi: 10.1016/j.jaci.2016.09.045

Stengel D, Zindler F, Braunbeck T (2016) An optimized method to assess ototoxic effects in the lateral line of zebrafish (Danio rerio) embryos. Comp Biochem Physiol C Toxicol Pharmacol, doi: 10.1016/j.cbpc.2016.11.001

Baßler J, Ahmed YL, Kallas M, Kornprobst M, Calviño FR, Gnädig M, Thoms M, Stier G, Ismail S, Kharde S, Castillo N, Griesel S, Bastuck S, Bradatsch B, Thomson E, Flemming D, Sinning I, Hurt E (2016) Interaction network of the ribosome assembly machinery from a eukaryotic thermophile. Protein Sci, doi: 10.1002/pro.3085

Ohle C*, Tesorero R*, Schermann G, Dobrev N, Sinning I, Fischer T (*equal contribution) (2016) Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair. Cell, 167, 4, 1001-1013

Kovacs I, Holzmeister C, Wirtz M, Geerlof A, Fröhlich T, Römling G, Kuruthukulangarakoola GT, Linster E, Hell R, Arnold GJ, Durner J, Lindermayr C. (2016) ROS-Mediated Inhibition of S-nitrosoglutathione Reductase Contributes to the Activation of Anti-oxidative Mechanisms. Front Plant Sci, 7, 1669

Kim JY, Cheng X, Wölfl S (2016) Acidic stress induced G1 cell cycle arrest and intrinsic apoptotic pathway in Jurkat T-lymphocytes. Exp Cell Res, doi: 10.1016/j.yexcr.2016.11.015

Ungelenk S, Moayed F, Ho CT, Grousl T, Scharf A, Mashaghi A, Tans S, Mayer MP, Mogk A, Bukau B (2016) Small heat shock proteins sequester misfolding proteins in near-native conformation for cellular protection and efficient refolding. Nat Commun, 7, 13673

Becker MM, Lapouge K, Segnitz B, Wild K, Sinning I (2016) Structures of human SRP72 complexes provide insights into SRP RNA remodeling and ribosome interaction. Nucleic Acids Res, pii: gkw1124

Gumiero A, Conz C, Gesé GV, Zhang Y, Weyer FA, Lapouge K, Kappes J, von Plehwe U, Schermann G, Fitzke E, Wölfle T, Fischer T, Rospert S, Sinning I (2016) Interaction of the cotranslational Hsp70 Ssb with ribosomal proteins and rRNA depends on its lid domain. Nat Commun, 7, 13563

Gröschel S, Bommer M, Hutter B, Budczies J, Bonekamp D, Heining C, Horak P, Fröhlich M, Uhrig S, Huebschmann D, Geörg C, Richter D, Pfarr N, Pfütze K, Wolf S, Schirmacher P, Jäger D, von Kalle C, Brors B, Glimm H, Weichert W, Stenzinger A, Fröhling S (2016) Integration of genomics and histology revises diagnosis and enables effective therapy of refractory cancer of unknown primary with PDL1 amplification. Cold Spring Harb Mol Case Stud, 2, 6, a001180

Zimmer J, Weitnauer M, Boutin S, Küblbeck G, Thiele S, Walker P, Lasitschka F, Lunding L, Orinska Z, Vock C, Arnold B, Wegmann M, Dalpke A (2016) Nuclear Localization of Suppressor of Cytokine Signaling-1 Regulates Local Immunity in the Lung. Front Immunol, 7, 514

Koch PS, Olsavszky V, Ulbrich F, Sticht C, Demory A, Leibing T, Henzler T, Meyer M, Zierow J, Schneider S, Breitkopf-Heinlein K, Gaitantzi H, Spencer-Dene B, Arnold B, Klapproth K, Schledzewski K, Goerdt S, Géraud C (2016) Angiocrine Bmp2 signaling in murine liver controls normal iron homeostasis. Blood, doi.org/10.1182/blood-2016-07-729822

Matern A, Pedrolli DB, Großhennig S, Johansson J, Mack M. (2016) Uptake and metabolism of the antibiotics roseoflavin and 8-demethyl-8-aminoriboflavin in riboflavin auxotrophic Listeria monocytogenes. J Bacteriol, 198, 23, 3233-3243

Pandey SS, Patnana PK, Lomada SK, Tomar A, Chatterjee S (2016) Co-regulation of Iron Metabolism and Virulence Associated Functions by Iron and XibR, a Novel Iron Binding Transcription Factor, in the Plant Pathogen Xanthomonas. PLoS Pathog, 12, 11, e1006019

Nwosu ZC, Ebert MP, Dooley S, Meyer C (2016) Caveolin-1 in the regulation of cell metabolism: a cancer perspective. Mol Cancer, 15, 1, 71

Boullé M, Müller TG, Dähling S, Ganga Y, Jackson L, Mahamed D, Oom L, Lustig G, Neher RA, Sigal A (2016) HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell PLoS Pathog, 12, 11

Forieri I, Sticht C, Reichelt M, Gretz N, Hawkesford MJ, Malagoli M, Wirtz M, Hell R (2016) Systems analysis of metabolism and the transcriptome in Arabidopsis thaliana roots reveals differential co-regulation upon iron, sulfur and potassium deficiency. Plant Cell Environ, doi: 10.1111/pce.12842

Shah JN, Kirioukhova O, Pawar P, Tayyab M, Mateo JL, Johnston A (2016) Depletion of Key Meiotic Genes and Transcriptome-Wide Abiotic Stress Reprogramming Mark Early Preparatory Events Ahead of Apomeiotic Transition Front Plant Sci, doi.org/10.3389/fpls.2016.01539

Mashaghi A, Bezrukavnikov S, Minde DP, Wentink AS, Kityk R, Zachmann-Brand B, Mayer MP, Kramer G, Bukau B, Tans SJ (2016) Alternative modes of client binding enable functional plasticity of Hsp70. Nature, doi: 10.1038/nature20137

Besharova O, Suchanek VM, Hartmann R, Drescher K, Sourjik V (2016) Diversification of Gene Expression during Formation of Static Submerged Biofilms by Escherichia coli. Front Microbiol, 7, 1568

Olsen CE, Huang XC, Hansen CI, Cipollini D, Ørgaard M, Matthes A, Geu-Flores F, Koch MA, Agerbirk N (2016) Glucosinolate diversity within a phylogenetic framework of the tribe Cardamineae (Brassicaceae) unraveled with HPLC-MS/MS and NMR-based analytical distinction of 70 desulfoglucosinolates. Phytochemistry, doi: 10.1016/j.phytochem.2016.09.013

Wild F, Khan MM, Straka T, Rudolf R (2016) Progress of endocytic CHRN to autophagic degradation is regulated by RAB5-GTPase and T145 phosphorylation of SH3GLB1 at mouse neuromuscular junctions in vivo. Autophagy, 1-11, doi.org/10.1080/15548627.2016.1234564

Rauscher B, Heigwer F, Breinig M, Winter J, Boutros M (2016) GenomeCRISPR - a database for high-throughput CRISPR/Cas9 screens. Nucl. Acids Res, doi: 10.1093/nar/gkw997

Luís C, Cannella N, Spanagel R, Köhr G (2016) Persistent strengthening of the prefrontal cortex – nucleus accumbens pathway during incubation of cocaine-seeking behavior. Neurobiol Learn Mem, doi: 10.1016/j.nlm.2016.10.003

Huber D, Jamshad M, Hanmer R, Schibich D, Döring K, Marcomini I, Kramer G, Bukau B (2016) SecA cotranslationally interacts with nascent substrate proteins in vivo. J Bacteriol, pii: JB.00622-16

Kirschbaum K, Sonner JK, Zeller MW, Deumelandt K, Bode J, Sharma R, Krüwel T, Fischer M, Hoffmann A, Costa da Silva M, Muckenthaler MU, Wick W, Tews B, Chen JW, Heiland S, Bendszus M, Platten M, Breckwoldt MO (2016) In vivo nanoparticle imaging of innate immune cells can serve as a marker of disease severity in a model of multiple sclerosis. Proc Natl Acad Sci U S A, pii: 201609397

Zindler F, Glomstad B, Altin D, Liu JF, Jenssen BM, Booth AM (2016) Phenanthrene Bioavailability and Toxicity to Daphnia Magna in the Presence of Carbon Nanotubes With Different Physicochemical Properties. Environ. Sci. Technol, 50, 22, 12446–12454

Abramson BK, Kachel B, Kramer DM, Ducat DC (2016) Increased Photochemical Efficiency in Cyanobacteria via an Engineered Sucrose Sink. Plant Cell Physiol, doi: 10.1093/pcp/pcw169

Shahinian JH, Füllgraf H, Tholen S, Mastroianni J, Knopf JD, Kuehs M, Mayer B, Schlimpert M, Kulemann B, Kuesters S, Hoeppner J, Wellner UF, Werner M, Hopt UT, Zeiser R, Bronsert P, Schilling O (2016) Pregnancy Specific β-1 Glycoprotein 1 is Expressed in Pancreatic Ductal Adenocarcinoma and its Subcellular Localization Correlates with Overall Survival. J Cancer, 7, 14, 2018-2027

Gao L, Gülcüler GS, Golbach L, Block H, Zarbock A, Martin-Villalba A (2016) Endothelial cell-derived CD95 ligand serves as a chemokine in induction of neutrophil slow rolling and adhesion. Elife, 5, pii: e18542

Platten M, Bunse L, Wick W, Bunse T (2016) Concepts in glioma immunotherapy. Cancer Immunol Immunother, 65, 10, 1269-75

Kumar R, Nawroth PP, Tyedmers J (2016) Prion Aggregates Are Recruited to the Insoluble Protein Deposit (IPOD) via Myosin 2-Based Vesicular Transport. PLoS Genet, 12, 9, e1006324

Wolfowicz I, Baumgarten S, Voss PA, Hambleton EA, Voolstra CR, Hatta M, Guse A (2016) Aiptasia sp. larvae as a model to reveal mechanisms of symbiont selection in cnidarians. Sci Rep, 6, 32366

Hernández Hidalgo I, Fleming T, Eckstein V, Herzig S, Nawroth PP, Tyedmers J (2016) Characterization of aggregate load and pattern in living yeast cells by flow cytometry. BioTechniques, 61, 137-148

Theer P, Dragneva D, Knop M (2016) πSPIM: high NA high resolution isotropic light-sheet imaging in cell culture dishes. Sci Rep, 6, 32880

Kummer E, Szlachcic A, Franke KB, Ungelenk S, Bukau B, Mogk A (2016) Bacterial and yeast AAA+ disaggregases ClpB and Hsp104 operate through conserved mechanism involving cooperation with Hsp70. J Mol Biol, doi: 10.1016/j.jmb.2016.09.003

Minia I, Merce C, Terrao M, Clayton C (2016) Translation Regulation and RNA Granule Formation after Heat Shock of Procyclic Form Trypanosoma brucei: Many Heat-Induced mRNAs Are also Increased during Differentiation to Mammalian-Infective Forms. PLoS Negl Trop Dis, 10, 9, e0004982

Sharma S, Poetz F, Bruer M, Ly-Hartig TBN, Schott J, Séraphin B, Stoecklin G (2016) Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2. Mol Cell, 63, 6, 927–938

Schweiggert J, Panigada D, Tan AN, Liakopoulos D (2016) Kar9 controls the nucleocytoplasmic distribution of yeast EB1. Cell Cycle, 13, 0

Rixecker T, Mathar I, Medert R, Mannebach S, Pfeifer A, Lipp P, Tsvilovskyy V, Freichel M (2016) TRPM4-mediated control of FcεRI-evoked Ca(2+) elevation comprises enhanced plasmalemmal trafficking of TRPM4 channels in connective tissue type mast cells. Sci Rep, 6, 32981

Trautz B, Pierini V, Wombacher R, Stolp B, Chase AJ, Pizzato M, Fackler OT (2016) The Antagonism of HIV-1 Nef to SERINC5 Particle Infectivity Restriction Involves the Counteraction of Virion-Associated Pools of the Restriction Factor J Virol, 90, 23, 10915-10927

Kirchmaier S, Lust K, Wittbrodt J (2016) Generation of DNA Constructs Using the Golden GATEway Cloning Method. Methods Mol Biol, 1472, 157-68

Goyal A, Myacheva K, Groß M, Klingenberg M, Duran Arqué B, Diederichs S (2016) Challenges of CRISPR/Cas9 applications for long non-coding RNA genes. Nucleic Acids Res, doi: 10.1093/nar/gkw883

Dinner S, Kaltschmidt J, Stump-Guthier C, Hetjens S, Ishikawa H, Tenenbaum T, Schroten H, Schwerk C (2016) Mitogen-activated protein kinases are required for effective infection of human choroid plexus epithelial cells by Listeria monocytogenes. Microbes Infect, doi: 10.1016/j.micinf.2016.09.003

Cerikan B, Shaheen R, Colo GP, Gläßer C, Hata S, Knobeloch KP, Alkuraya FS, Fässler R, Schiebel E (2016) Cell-Intrinsic Adaptation Arising from Chronic Ablation of a Key Rho GTPase Regulator. Dev Cell, doi: 10.1016/j.devcel.2016.08.020

Styles EB, Founk KJ, Zamparo LA, Sing TL, Altintas D, Ribeyre C, Ribaud V, Rougemont J, Mayhew D, Costanzo M, Usaj M, Verster AJ, Koch EN, Novarina D, Graf M, Luke B, Muzi-Falconi M, Myers CL, Mitra RD, Shore D, Brown GW, Zhang Z, Boone C, Andrews BJ (2016) Exploring Quantitative Yeast Phenomics with Single-Cell Analysis of DNA Damage Foci. Cell Syst, 3, 3, 264-277

Amm I, Kawan M, Wolf DH (2016) Characterization of protein quality control components via dual reporter-containing misfolded cytosolic model substrates. Anal Biochem, 515, 14-21

Senis E, Mockenhaupt S, Rupp D, Bauer T, Paramasivam N, Knapp B, Gronych J, Grosse S, Windisch MP, Schmidt F, Theis FJ, Eils R, Lichter P, Schlesner M, Bartenschlager R, Grimm D (2016) TALEN/CRISPR-mediated engineering of a promoterless anti-viral RNAi hairpin into an endogenous miRNA locus. Nucleic Acids Res, doi: 10.1093/nar/gkw805

Michler T, Grosse S, Mockenhaupt S, Röder N, Stückler F, Knapp B, Ko C, Heikenwalder M, Protzer U, Grimm D (2016) Blocking sense-strand activity improves potency, safety and specificity of anti-hepatitis B virus short hairpin RNA. EMBO Mol Med, 8, 9, 1082-98

Dieter SM, Heining C, Agaimy A, Huebschmann D, Bonekamp D, Hutter B, Ehrenberg KR, Fröhlich M, Schlesner M, Scholl C, Schlemmer HP, Wolf S, Mavratzas A, Jung CS, Gröschel S, Kalle CV, Eils R, Brors B, Penzel R, Kriegsmann M, Reuss DE, Schirmacher P, (2016) Mutant KIT as Imatinib-Sensitive Target in Metastatic Sinonasal Carcinoma. Ann Oncol, pii: mdw446. [Epub ahead of print]

Ritterhoff T, Das H, Hao Y, Sakin V, Flotho A, Werner A, Melchior F (2016) Reconstitution of the Recombinant RanBP2 SUMO E3 Ligase Complex. Methods Mol Biol, 1475, 41-54

Lerchenmüller C, Heißenberg J, Damilano F, Bezzeridis VJ, Krämer I, Bochaton-Piallat ML, Hirschberg K, Busch M, Katus HA, Peppel K, Rosenzweig A, Busch H, Boerries M, Most P (2016) S100A6 Regulates Endothelial Cell Cycle Progression by Attenuating Antiproliferative Signal Transducers and Activators of Transcription 1 Signaling. Arterioscler Thromb Vasc Biol, 36, 9, 1854-67

Borsari C, Luciani R, Pozzi C, Pöhner I, et al. (2016) Profiling of flavonol derivatives for the development of anti-trypanosomatidic drugs. J Med Chem, 59, 16, 7598

Schibich D, Gloge F, Pöhner I, Björkholm P, Wade RC, von Heijne G, Bukau B, Kramer G (2016) Global profiling of SRP interaction with nascent polypeptides. Nature 536, 219-223, doi:10.1038/nature19070

Agircan FG, Hata S, Nussbaum-Krammer C, Atorino E, Schiebel E (2016) Proximity mapping of human separase by the BioID approach. Biochem Biophys Res Commun, doi: 10.1016/j.bbrc.2016.08.002

Hanne J, Göttfert F, Schimer J, Anders-Össwein M, Konvalinka J, Engelhardt J, Müller B, Hell SW, Kräusslich H-G (2016) Stimulated Emission Depletion Nanoscopy Reveals Time-Course of Human Immunodeficiency Virus Proteolytic Maturation. ACS Nano, 10, 9, 8215-22

Carvalho S, Oliveira T, Bartels MF, Miyoshi E, Pierce M, Taniguchi N, Carneiro F, Seruca R, Reis CA, Strahl S, Pinho SS (2016) O–mannosylation and N-glycosylation: two coordinated mechanisms regulating the tumour suppressor functions of E-cadherin in cancer. Oncotarget, doi: 10.18632/oncotarget.11245

Lempp FA, Ni Y, Urban S (2016) Hepatitis delta virus: insights into a peculiar pathogen and novel treatment options. Nat Rev Gastroenterol Hepatol, doi: 10.1038/nrgastro.2016.126

Aghaallaei N, Gruhl F, Schaefer CQ, Wernet T, Weinhardt V, Centanin L, Loosli F, Baumbach T, Wittbrodt J (2016) Identification, visualization and clonal analysis of intestinal stem cells in fish. Development, doi: 10.1242/dev.134098

Hefter D, Kaiser M, Weyer SW, Papageorgiou IE, Both M, Kann O, Müller UC, Draguhn A (2016) Amyloid Precursor Protein Protects Neuronal Network Function after Hypoxia via Control of Voltage-Gated Calcium Channels. J Neurosci, 36, 32, 8356-71

Somavanshi R, Ghosh B, Sourjik V (2016) Sugar Influx Sensing by the Phosphotransferase System of Escherichia coli. PLoS Biol, 14, 8, e2000074

Hiras J, Wu YW, Deng K, Nicora CD, Aldrich JT, Frey D, Kolinko S, Robinson EW, Jacobs JM, Adams PD, Northen TR, Simmons BA, Singer SW (2016) Comparative Community Proteomics Demonstrates the Unexpected Importance of Actinobacterial Glycoside Hydrolase Family 12 Protein for Crystalline Cellulose Hydrolysis. MBio, 7, 4

Ulrich V, Peschke M, Brieke C, Cryle MJ (2016) More than just recruitment: the X-domain influences catalysis of the first phenolic coupling reaction in A47934 biosynthesis by Cytochrome P450 StaH. Mol Biosyst./ 2992-3004

Zhang JJ, Muenzner JK, Abu El Maaty MA, Karge B, Schobert R, Wölfl S, Ott I (2016) A multi-target caffeine derived rhodium(i) N-heterocyclic carbene complex: evaluation of the mechanism of action. Dalton Trans, 45, 33, 13161-8

Ni J, Hölsken O, Miller M, Hammer Q, Luetke-Eversloh M, Romagnani C, Cerwenka A (2016) Adoptively transferred natural killer cells maintain long-term antitumor activity by epigenetic imprinting and CD4+ T cell help. Oncoimmunology, 5, 9, e1219009

Kittilä T, Mollo A, Charkoudian LK, Cryle MJ (2016) New Structural Data Reveal the Motion of Carrier Proteins in Nonribosomal Peptide Synthesis. Angew Chem Int Ed Engl, 55, 34, 9834-40

Salem O, Erdem N, Jung J, Münstermann E, Wörner A, Wilhelm H, Wiemann S, Körner C. (2016) The highly expressed 5'isomiR of hsa-miR-140-3p contributes to the tumor-suppressive effects of miR-140 by reducing breast cancer proliferation and migration. BMC Genomics

Schmitz R, Valls AF, Yerbes R, von Richter S, Kahlert C, Loges S, Weitz J, Schneider M, Ruiz de Almodovar C, Ulrich A, Schmidt T. (2016) TAM receptors Tyro3 and Mer as novel targets in colorectal cancer. Oncotarget, 7, 35, 56355-56370.

Banderas A, Koltai M, Anders A, Sourjik V (2016) Sensory input attenuation allows predictive sexual response in yeast. Nat Commun, 7, 12590

Hanne J, Zila V, Heilemann M, Müller B and Kräusslich H-G (2016) Super-resolved insights into human immunodeficiency virus biology. FEBS Letters, doi:10.1002/1873-3468.12186

La Venuta G, Wegehingel S, Sehr P, Müller HM, Dimou E, Steringer JP, Grotwinkel M, Hentze N, Mayer MP, Will DW, Uhrig U, Lewis JD, Nickel W (2016) Small molecule inhibitors targeting Tec kinase block unconventional secretion of fibroblast growth factor 2. J Biol Chem, doi:10.1074/jbc.M116.729384

Meireles P, Sales-Dias J, Andrade CM, Mello-Vieira J, Mancio-Silva L, Simas JP, Staines HM, Prudêncio M (2016) GLUT1-mediated glucose uptake plays a crucial role during Plasmodium hepatic infection Cell Microbiol, doi: 10.1111/cmi.12646

Kornprobst M, Turk M, Kellner N, Cheng J, Flemming D, Kos-Braun I, Kos M, Thoms M, Berninghausen O, Beckmann R, Hurt E (2016) Architecture of the 90S pre-ribosome: a structural view on the birth of the eukaryotic ribosome. Cell, 166, 380-393

Ghosh Dastidar M, Mosiolek M, Bleckmann A, Dresselhaus T, Nodine MD, Maizel A (2016) Sensitive whole mount in situ localization of small RNAs in plants. Plant J, doi: 10.1111/tpj.13270

Yachdav G, Wilzbach S, Rauscher B, Sheridan R, Sillitoe I, Procter J, Lewis S, Rost B, Goldberg T (2016) MSAViewer: interactive JavaScript visualization of multiple sequence alignments. Bioinformatics, doi: 10.1093/bioinformatics/btw474

Bane KS, Lepper S, Kehrer J, Sattler JM, Singer M, Reinig M, Klug D, Heiss K, Baum J, Mueller AK, Frischknecht F (2016) The Actin Filament-Binding Protein Coronin Regulates Motility in Plasmodium Sporozoites. PLoS Pathog, 12, 7, e1005710

Höfer K, Li S, Abele F, Frindert J, Schlotthauer J, Grawenhoff J, Du J, Patel DJ, Jäschke A (2016) Structure and function of the bacterial decapping enzyme NudC. Nat Chem Biol, doi:10.1038/nchembio.2132

Kokkula C, Palanisamy N, Ericstam M, Lennerstrand J. (2016) SYBR Green II Dye-Based Real-Time Assay for Measuring Inhibitor Activity Against HIV-1 Reverse Transcriptase. Mol Biotechnol, DOI: 10.1007/s12033-016-9961-y

Novikova PY, Hohmann N, Nizhynska V, Tsuchimatsu T, Ali J, Muir G, Guggisberg A, Paape T, Schmid K, Fedorenko OM, Holm S, Säll T10, Schlötterer C, Marhold K, Widmer A, Sese J, Shimizu KK, Weigel D, Krämer U, Koch MA, Nordborg M (2016) Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism. Nat Genet, doi: 10.1038/ng.3617

Pfeiffer A, Janocha D, Dong Y, Medzihradszky A, Schöne S, Daum G, Suzaki T, Forner J, Langenecker T, Rempel E, Schmid M, Wirtz M, Hell R, Lohmann JU (2016) Integration of light and metabolic signals for stem cell activation at the shoot apical meristem. eLIFEElife, doi: 10.7554/eLife.17023

Schur FK, Obr M, Hagen WJ, Wan W, Jakobi AJ, Kirkpatrick JM, Sachse C, Kräusslich HG, Briggs JA (2016) An atomic model of HIV-1 capsid-SP1 reveals structures regulating assembly and maturation. Science, DOI: 10.1126/science.aaf9620

Waldecker M, Dasanna AK, Lansche C, Linke M, Srismith S, Cyrklaff M, Sanchez C, Schwarz U, Lanzer M (2016) Differential time-dependent volumetric and surface area changes and delayed induction of new permeation pathways in haemoglobinopathic erythrocytes. Cell Microbiol, doi: 10.1111/cmi.12650

Michler T, Grosse S, Mockenhaupt S, Röder N, Stückler F, Knapp B, Ko C, Heikenwalder M, Protzer U, Grimm D (2016) Blocking sense-strand activity improves potency, safety and specificity of anti-hepatitis B virus short hairpin RNA. EMBO Mol Med, doi: 10.15252/emmm.201506172

Weigt D, Hopf C, Médard G (2016) Studying epigenetic complexes and their inhibitors with the proteomics toolbox. Clin Epigenetics, 8, 76

Feng Y, Gross S, Chatterjee A, Wang Y, Lin J, Hammes HP (2016) Transcription of Inflammatory Cytokine TNFα is Upregulated in Retinal Angiogenesis under Hyperoxia. Cell Physiol Biochem, 39, 2, 573-83

Wagner CJ, Schultz C, Mall MA (2016) Neutrophil elastase and matrix metalloproteinase 12 in cystic fibrosis lung disease. Mol Cell Pediatr, 3, 1, 25

Pujol FM, Laketa V, Schmidt F, Mukenhirn M, Müller B, Boulant S, Grimm D, Keppler OT, Fackler OT (2016) HIV-1 Vpu Antagonizes CD317/Tetherin by Adaptor Protein-1-Mediated Exclusion from Virus Assembly Sites. J Virol, 90, 15, 6709-23

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